PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ciclev10002029m
Common NameCICLE_v10002029mg
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family bZIP
Protein Properties Length: 295aa    MW: 32492.1 Da    PI: 7.1482
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Ciclev10002029mgenomeICGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_1422e-13201258460
                      XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH.HHHHHHHHHHHHHHH CS
           bZIP_1   4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaL.kkeleelkkevaklk 60 
                       +++rr++kNRe+A rsR+RK+a++ eLe  v +Le+e  +L ++e+e+ k+  ++l 
  Ciclev10002029m 201 QQKQRRMIKNRESAARSRERKQAYTVELESLVTQLEEEKARLlREEAEQNKQRFKQLM 258
                      689***********************************99853888998888887775 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1706.0E-13194259No hitNo description
SMARTSM003385.1E-11198262IPR004827Basic-leucine zipper domain
PfamPF001703.6E-11200258IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.473200252IPR004827Basic-leucine zipper domain
SuperFamilySSF579596.25E-10202252No hitNo description
CDDcd147074.27E-18202249No hitNo description
PROSITE patternPS000360205220IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 295 aa     Download sequence    Send to blast
MMASSKVMAT ASTTNTDLPC QQQPSSICPS SLSSMLADDP PNCLGSMNMD DLLKNIYATP  60
TPDQLALGSG ASIPRDVNDT GSANDNSGTN NNNNNNSSND DNNKSVDEVW KQIVAGGSDQ  120
RRAGAADEEM TLEDFLTKAG AVREEDVRPY GNNNNNNNNN INNINSNNNN QLVVVGPGGG  180
GGGGRGKRRI VEEPPMDKAT QQKQRRMIKN RESAARSRER KQAYTVELES LVTQLEEEKA  240
RLLREEAEQN KQRFKQLMEN LIPVVEKRRP PRVLRRVNSL HCLRSLPLRL YQIE*
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Ccl.41500.0fruit| root
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006432284.10.0hypothetical protein CICLE_v10002029mg
TrEMBLV4V1630.0V4V163_9R
STRINGVIT_12s0055g00420.t012e-80(Vitis vinifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM16538611
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G44080.13e-28bZIP family protein